CSE 594 - Medical Imaging

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Course Schedule:

Date
Topic
Supplemental Reading
Homeworks/Labs
Handouts
09/04
Introduction and overview, historical aspects


intro
09/06
Definitions
Suet. 2, pp. 3-7

definitions
09/11
Linear systems theory
Suet. 2, pp. 8-16
linearSystems
09/18
Linear systems theory
see above

see above
convolution animation
09/20
Fourier theory
Suet. 2, pp. 16-26
homework 1
fourier
09/25
Image acquisition and sampling
Suet. 2, pp. 16-26 homework 2 sampling
09/27
Image enhancement, introduction to matlab
Suet. 4, pp. 27-43
matlab: tutorial1  tutorial2
lab 1
imageOps
matlabTutorial
10/02
X-ray physics
Suet. 5, pp 47-49

radiography
10/04
X-ray detectors, radiography, clinical  applications, safety
Suet. 5, pp. 49-65

see above
10/09
CT data acquisition Suet. 5, pp. 66-74 lab 2 (updated)
ct
10/11
CT reconstruction algorithms: parallel beam Suet. 5, pp. 74-78
see above
10/16
CT reconstruction algorithms: fan-beam
Suet. 5, pp. 78-83
see above
10/18
CT reconstruction algorithms: cone-beam, spiral Suet. 5, pp. 78-83
see above
10/23
CT image quality, scanners, clinical applications Suet. 5, pp. 83-98

ctQuality
10/25
Review session (attendance optional)



10/30
no lecture (midterm  for cse377)



11/01
Ultrasound imaging: physics and data acquisition
Suet. 7, pp.  145-164
ultrasound
11/06
no lecture (cse 377 midterm returned and discussion)

lab 3   data
see above
11/09 Ultrasound imaging: doppler and flow Suet. 7, pp. 164-168
see above
11/13 Nuclear imaging: basics
Suet. 8, pp. 184-193

nuclear
11/14
Special lecture on exact CT: Theory (CS 1441)


ct_coneBeam
11/15
Nuclear imaging: iterative reconstruction algorithms
Suet. 8, pp. 193-209

nuclearEM
11/20 MRI physics
Suet. 6, pp. 99-109

mriPhysics
11/21
Special lecture on iterative CT: (CS 1441)

see nuclearEM
11/27 MRI imaging concepts
Suet. 6, pp. 109-122

mriImaging
11/29 MRI imaging mathematics
Suet. 6, pp. 109-122 homework 3
see above
12/06
MRI imaging modes
Suet. 6, pp. 109-122
see above
12/07 Special lecture on exact CT: Algorithms (CS 1441)

ct_spiral  GPU
12/08 MRI applications and advanced techniques
Suet. 6, pp. 122-144
see above
12/11 Medical visualization


12/13 Medical visualization



12/19
Final project presentations (Time TBD)