96 known transcription inhibitions in alpha data set sorted by edge function score
| # | Inhibitor | | Inhibitee | Edge function score | |
| 1 | FUS3 | (-) | CLN2 | -0.504160 | plot |
| 2 | FUS3 | (-) | CLB5 | -0.499979 | plot |
| 3 | TUP1 | (-) | CYC1 | -0.364516 | plot |
| 4 | ACE2 | (-) | SIC1 | -0.294808 | plot |
| 5 | RAP1 | (-) | RPP2B | -0.272161 | plot |
| 6 | PHO80 | (-) | PHO4 | -0.258603 | plot |
| 7 | UME6 | (-) | CAR2 | -0.243058 | plot |
| 8 | PPZ1 | (-) | ENA1 | -0.186692 | plot |
| 9 | GCN4 | (-) | MET14 | -0.168520 | plot |
| 10 | TUP1 | (-) | ANB1 | -0.156360 | plot |
| 11 | RPD3 | (-) | PHO3 | -0.152568 | plot |
| 12 | SIN4 | (-) | IME1 | -0.145507 | plot |
| 13 | ACC1 | (-) | PHO5 | -0.127554 | plot |
| 14 | FAR1 | (-) | CLN2 | -0.124593 | plot |
| 15 | RGT1 | (-) | HXT2 | -0.123067 | plot |
| 16 | GCD1 | (-) | ILS1 | -0.110655 | plot |
| 17 | ROX1 | (-) | OLE1 | -0.107358 | plot |
| 18 | UME6 | (-) | CDC19 | -0.102881 | plot |
| 19 | FUS3 | (-) | CDC28 | -0.101752 | plot |
| 20 | TUP1 | (-) | RNR1 | -0.098266 | plot |
| 21 | PHO85 | (-) | GSY2 | -0.085641 | plot |
| 22 | MIG1 | (-) | CAT8 | -0.076238 | plot |
| 23 | SIN3 | (-) | SPO13 | -0.071272 | plot |
| 24 | GCD11 | (-) | GCN4 | -0.057726 | plot |
| 25 | TUP1 | (-) | HXT4 | -0.054722 | plot |
| 26 | UME6 | (-) | CAR1 | -0.046251 | plot |
| 27 | GCD1 | (-) | GLN1 | -0.035894 | plot |
| 28 | PHO80 | (-) | PHO11 | -0.022308 | plot |
| 29 | UME6 | (-) | SPO13 | -0.003304 | plot |
| 30 | MIG1 | (-) | JEN1 | 0.000000 | plot |
| 31 | MIG1 | (-) | SUC2 | 0.000000 | plot |
| 32 | RGT1 | (-) | HXT1 | 0.000000 | plot |
| 33 | MIG2 | (-) | CAT8 | 0.000000 | plot |
| 34 | MIG2 | (-) | JEN1 | 0.000000 | plot |
| 35 | MIG2 | (-) | TPS1 | 0.000000 | plot |
| 36 | RGR1 | (-) | IME1 | 0.000000 | plot |
| 37 | CAT8 | (-) | JEN1 | 0.000000 | plot |
| 38 | CBF1 | (-) | CYC1 | 0.000000 | plot |
| 39 | RFA3 | (-) | FOX2 | 0.000000 | plot |
| 40 | RPS14A | (-) | RPS14B | 0.000000 | plot |
| 41 | PHO85 | (-) | PHO4 | 0.000000 | plot |
| 42 | CBF1 | (-) | MET17 | 0.000000 | plot |
| 43 | RFA2 | (-) | FOX2 | 0.000000 | plot |
| 44 | ROX1 | (-) | ERG10 | 0.000000 | plot |
| 45 | RAS2 | (-) | TRX2 | 0.000000 | plot |
| 46 | REB1 | (-) | ENO1 | 0.000000 | plot |
| 47 | RFA1 | (-) | FOX2 | 0.000000 | plot |
| 48 | ROX1 | (-) | CYC7 | 0.000000 | plot |
| 49 | GAL80 | (-) | PGM2 | 0.000000 | plot |
| 50 | SKO1 | (-) | HIS3 | 0.000000 | plot |
| 51 | SKO1 | (-) | SUC2 | 0.000000 | plot |
| 52 | SPT6 | (-) | CCR4 | 0.000000 | plot |
| 53 | GCN3 | (-) | GCD1 | 0.000000 | plot |
| 54 | GDI1 | (-) | SEC18 | 0.000000 | plot |
| 55 | TUP1 | (-) | CYC7 | 0.000000 | plot |
| 56 | ROX1 | (-) | ANB1 | 0.000000 | plot |
| 57 | ROX1 | (-) | AAC3 | 0.000000 | plot |
| 58 | TUP1 | (-) | ROX1 | 0.000000 | plot |
| 59 | TUP1 | (-) | STE5 | 0.000000 | plot |
| 60 | TUP1 | (-) | SUC2 | 0.000000 | plot |
| 61 | UME6 | (-) | ACS1 | 0.000000 | plot |
| 62 | RGT1 | (-) | HXT4 | 0.000000 | plot |
| 63 | MIG1 | (-) | FAS2 | 0.000000 | plot |
| 64 | MIG1 | (-) | GAL4 | 0.000000 | plot |
| 65 | UME6 | (-) | FOX2 | 0.000000 | plot |
| 66 | MIG1 | (-) | HXT4 | 0.000000 | plot |
| 67 | URE2 | (-) | GDH2 | 0.000000 | plot |
| 68 | URE2 | (-) | GLN1 | 0.000000 | plot |
| 69 | URE2 | (-) | PUT1 | 0.000000 | plot |
| 70 | URE2 | (-) | PUT2 | 0.000000 | plot |
| 71 | REG1 | (-) | ADH2 | 0.019141 | plot |
| 72 | RFA1 | (-) | CAR1 | 0.031829 | plot |
| 73 | KSS1 | (-) | CDC28 | 0.045854 | plot |
| 74 | TUP1 | (-) | HXT2 | 0.049133 | plot |
| 75 | UME6 | (-) | IME1 | 0.058655 | plot |
| 76 | TUP1 | (-) | SST2 | 0.063874 | plot |
| 77 | CBF1 | (-) | CYT1 | 0.090327 | plot |
| 78 | PHO80 | (-) | PHO5 | 0.112294 | plot |
| 79 | MIG1 | (-) | HXT2 | 0.113547 | plot |
| 80 | TUP1 | (-) | DIT1 | 0.117201 | plot |
| 81 | DUN1 | (-) | DIN7 | 0.137648 | plot |
| 82 | TUP1 | (-) | STE4 | 0.152336 | plot |
| 83 | PPZ2 | (-) | ENA1 | 0.163102 | plot |
| 84 | FAR1 | (-) | CDC28 | 0.164856 | plot |
| 85 | TUP1 | (-) | STE6 | 0.170202 | plot |
| 86 | UME6 | (-) | ILV2 | 0.186440 | plot |
| 87 | RFA2 | (-) | CAR1 | 0.190969 | plot |
| 88 | PHO23 | (-) | PHO5 | 0.197702 | plot |
| 89 | KSS1 | (-) | CLB5 | 0.208095 | plot |
| 90 | MIG1 | (-) | TPS1 | 0.224774 | plot |
| 91 | CBF1 | (-) | QCR8 | 0.225339 | plot |
| 92 | RFA3 | (-) | CAR1 | 0.237822 | plot |
| 93 | RPD3 | (-) | ERG10 | 0.248026 | plot |
| 94 | ROX1 | (-) | HEM13 | 0.251318 | plot |
| 95 | KSS1 | (-) | CLN2 | 0.278084 | plot |
| 96 | DAL81 | (-) | CAR2 | 0.328887 | plot |